Error in workflow
Dear Christian,
I used the workflow version module load tools/mflow/0.4.17-foss-2021b-Python-3.9.6 but I get an error which means that the program couldnot reach my protein in pdb format, or maybe the way I make the zip file is wrong, I think. my protein isnot in PBD database.
here is the bath of my folder "/lustre/project/m2_jgu-smitt\Docking\Mona\DLK1
/usr/bin/bash: /lustre/scratch/m2_jgu-smitt/unzipped/PDB/receptor/DLK1.pdb: Permission denied touch: cannot touch '/lustre/scratch/m2_jgu-smitt/unzipped/PDB/receptor/DLK1.pdb': Permission denied Error in rule gunzip: jobid: 112 output: /lustre/scratch/m2_jgu-smitt/unzipped/PDB/receptor/DLK1.pdb shell: gunzip < /lustre/project/m2_jgu-smitt/data/raw/PDB/receptor/DLK1.pdb.gz > /lustre/scratch/m2_jgu-smitt/unzipped/PDB/receptor/DLK1.pdb || touch /lustre/scratch/m2_jgu-smitt/unzipped/PDB/receptor/DLK1.pdb (one of the commands exited with non-zero exit code; note that snakemake uses bash strict mode!)
what do you think?
Thank you so much in advance cordial regards Mona