Commits · master · HPC - JGU - Life Sciences / seq-analysis

24 Sep, 2019 3 commits
- Merge branch 'devel' into 'master' · 1d6458be
  Christian Meesters authored Sep 24, 2019
```
Devel

Closes #30

See merge request !18
```
  1d6458be
- LA_Wrapper: updated version and history info · cd18464c
  Christian Meesters authored Sep 24, 2019
  
  cd18464c
- stage_in: hot fix, 'find' now dereferences links · 40cbb30b
  Christian Meesters authored Sep 24, 2019
  
  40cbb30b
09 Sep, 2019 1 commit
- outcommented print line in splitter · f57c8ea2
  Christian Meesters authored Sep 09, 2019
  
  f57c8ea2
03 Sep, 2019 1 commit
- some fixes in the autoselection and biopython selection scheme · d6381c08
  Christian Meesters authored Sep 03, 2019
  
  d6381c08
02 Sep, 2019 1 commit
- by using the biopython module version conflicts show be avoided · 40443c28
  Christian Meesters authored Sep 02, 2019
  
  40443c28
30 Aug, 2019 3 commits
- fix: realpath of db instead of potential relative paths · fb3a1032
  Christian Meesters authored Aug 30, 2019
  
  fb3a1032
- removed --no-requeue · 99751f80
  Christian Meesters authored Aug 30, 2019
  
  99751f80
- corrected eb config to account for the stage-in · e6680616
  Christian Meesters authored Aug 30, 2019
  
  e6680616
29 Aug, 2019 7 commits
- updated version and info · 454ff5b0
  Christian Meesters authored Aug 29, 2019
  
  454ff5b0
- new version, accounting for stage_in script · 08656d71
  Christian Meesters authored Aug 29, 2019
  
  08656d71
- no more debugging output · aad14f49
  Christian Meesters authored Aug 29, 2019
  
  aad14f49
- fix: now zero instead of white space padding · cacffd1b
  Christian Meesters authored Aug 29, 2019
  
  cacffd1b
- less verbose, removed debugging output · c2b944d4
  Christian Meesters authored Aug 29, 2019
  
  c2b944d4
- corrected various minor glitches: sample finding and sanity checks · 142c65a1
  Christian Meesters authored Aug 29, 2019
  
  142c65a1
- remedy for the file corruption issue? · c219169b
  Christian Meesters authored Aug 29, 2019
  
  c219169b
28 Aug, 2019 5 commits
- fix: issue #30 · 990a2b6e
  Christian Meesters authored Aug 28, 2019
  
  990a2b6e
- conditional compression on · e7423ac0
  Christian Meesters authored Aug 28, 2019
  
  e7423ac0
- apparently sequential copy is needed · 5509f2df
  Christian Meesters authored Aug 28, 2019
  
  5509f2df
- so far so ungood · 18ad00be
  Christian Meesters authored Aug 28, 2019
  
  18ad00be
- so far so ungood · 64b3185a
  Christian Meesters authored Aug 28, 2019
  
  64b3185a
27 Aug, 2019 1 commit
- added a stage-in script to ensure minimal amount of communication (e.g. ssh) for stage-in · 0ad2386c
  Christian Meesters authored Aug 27, 2019
  
  0ad2386c
21 Aug, 2019 10 commits
- compression now default; blast executable check is off - module is loaded in the wrapper · 74a47a5a
  Christian Meesters authored Aug 21, 2019
  
  74a47a5a
- Merge branch 'devel' into 'master' · c41b2f36
  Christian Meesters authored Aug 21, 2019
```
Devel

See merge request !17
```
  c41b2f36
- changed UI default message for split arg · 9de9d0be
  Christian Meesters authored Aug 21, 2019
  
  9de9d0be
- reduced the number of split files for the default · 14739780
  Christian Meesters authored Aug 21, 2019
  
  14739780
- too few digits · 60bb252f
  Christian Meesters authored Aug 21, 2019
  
  60bb252f
- zero padding for better sorting · 01903e30
  Christian Meesters authored Aug 21, 2019
  
  01903e30
- Merge branch 'devel' into 'master' · 5d9b50ab
  Christian Meesters authored Aug 21, 2019
```
Devel

See merge request !16
```
  5d9b50ab
- updated version · 150a061e
  Christian Meesters authored Aug 21, 2019
  
  150a061e
- switched to specific version · 2ae9eb76
  Christian Meesters authored Aug 21, 2019
  
  2ae9eb76
- - outmerging for out files · f9b1e397
  Christian Meesters authored Aug 21, 2019
```
- improved UI
- minor debugging
```
  f9b1e397
02 Jul, 2019 5 commits
- hot fix: avoiding compatibility issues · af3b0e6c
  Christian Meesters authored Jul 02, 2019
  
  af3b0e6c
- loading the most current version of GNU parallel, indeed · 1154a99b
  Christian Meesters authored Jul 02, 2019
  
  1154a99b
- Merge branch 'master' into 'devel' · 5ed2df07
  Christian Meesters authored Jul 02, 2019
```
# Conflicts:
#   blast/parallel_BLAST/LA_Wrapper
```
  5ed2df07
- updated license info · 603612c7
  Christian Meesters authored Jul 02, 2019
  
  603612c7
- avoiding compatibility conflicts · 99f59e51
  Christian Meesters authored Jul 02, 2019
  
  99f59e51
27 Jun, 2019 2 commits
- Update LICENSE · 15179dd6
  Christian Meesters authored Jun 27, 2019
  
  15179dd6
- update licensing info · c1d91f30
  Christian Meesters authored Jun 27, 2019
  
  c1d91f30
03 Apr, 2019 1 commit
- new version: 0.2 - accounting for update · 5e91b0a4
  Christian Meesters authored Apr 03, 2019
  
  5e91b0a4