From fb3a1032cb42b750656f984853592af10115b622 Mon Sep 17 00:00:00 2001
From: meesters <meesters@uni-mainz.de>
Date: Fri, 30 Aug 2019 22:13:26 +0200
Subject: [PATCH] fix: realpath of db instead of potential relative paths

---
 blast/parallel_BLAST/LA_Wrapper | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/blast/parallel_BLAST/LA_Wrapper b/blast/parallel_BLAST/LA_Wrapper
index 1035ae7..9830e3d 100755
--- a/blast/parallel_BLAST/LA_Wrapper
+++ b/blast/parallel_BLAST/LA_Wrapper
@@ -446,7 +446,7 @@ done
 
 ### get query and database files
 FASTA=$_arg_fasta
-DATABASE=$_arg_database
+DATABASE=$(realpath $_arg_database)
 
 ### check if query & database exist
 if [[ $_arg_test == "off" ]] && [ ! -e "$FASTA" ]; then
-- 
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