From fb3a1032cb42b750656f984853592af10115b622 Mon Sep 17 00:00:00 2001 From: meesters Date: Fri, 30 Aug 2019 22:13:26 +0200 Subject: [PATCH] fix: realpath of db instead of potential relative paths --- blast/parallel_BLAST/LA_Wrapper | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/blast/parallel_BLAST/LA_Wrapper b/blast/parallel_BLAST/LA_Wrapper index 1035ae7..9830e3d 100755 --- a/blast/parallel_BLAST/LA_Wrapper +++ b/blast/parallel_BLAST/LA_Wrapper @@ -446,7 +446,7 @@ done ### get query and database files FASTA=$_arg_fasta -DATABASE=$_arg_database +DATABASE=$(realpath $_arg_database) ### check if query & database exist if [[ $_arg_test == "off" ]] && [ ! -e "$FASTA" ]; then -- GitLab