Commit d415d0cd authored by Christian Meesters's avatar Christian Meesters

fix: accounting for local database path

parent 455f0056
#!/bin/bash #!/bin/bash
#set -x set -x
#set -e set -e
#PS4='Line ${LINENO}: ' PS4='Line ${LINENO}: '
module unuse /cluster/easybuild/modules/all module unuse /cluster/easybuild/modules/all
module use /cluster/easybuild/nehalem/modules/all module use /cluster/easybuild/nehalem/modules/all
...@@ -389,7 +389,7 @@ fi ...@@ -389,7 +389,7 @@ fi
### prepare filepath and -names for creating working folder ### prepare filepath and -names for creating working folder
FASTAPATH=$(dirname $FASTA) FASTAPATH=$(dirname $FASTA)
DATABASEPATH=$(dirname $DATABASE) DATABASEPATH=$(realpath $DATABASE)
FASTAID=$(basename $FASTA) FASTAID=$(basename $FASTA)
DATABASEID=$(basename $DATABASE) DATABASEID=$(basename $DATABASE)
......
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