Commit 990a2b6e authored by Christian Meesters's avatar Christian Meesters

fix: issue #30

parent e7423ac0
......@@ -534,7 +534,7 @@ if [ $_arg_paired -eq 1 ]; then
if [[ ${samples[0]} == *"_R1"* || ${samples[0]} == *"_R2"* ]]; then
first='_R1'
second='_R2'
elif [[ ${samples[0]} == *"_1"* ]]; then
elif [[ ${samples[0]} == *"_1"* ]] || [[ ${samples[0]} == *"_2"* ]]; then
first='_1'
second='_2'
else
......
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