Commit 5509f2df authored by Christian Meesters's avatar Christian Meesters

apparently sequential copy is needed

parent 18ad00be
...@@ -5,9 +5,9 @@ cat <<EOF > $stagefile ...@@ -5,9 +5,9 @@ cat <<EOF > $stagefile
target=/localscratch/$SLURM_JOB_ID/ramdisk target=/localscratch/$SLURM_JOB_ID/ramdisk
cd \$target cd \$target
for fname in \$(find ${DATABASEPATH} -type f ); do for fname in \$(find ${DATABASEPATH} -type f ); do
suffix=\${fname#*.} #suffix=\${fname#*.}
outfile=db.\${suffix} outfile=\$(basename \${fname})
dd bs=4048 if=\$fname of=\$outfile & cp -L \$fname \$outfile
done done
cd - cd -
EOF EOF
......
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